Bioconversion of whey permeate to 2,3-butanediol at bioreactor scale

    PI: Victor Ujor

    Phone

    Ujor is an assistant professor of food science at UW–Madison. His research interests include renewable fuels and chemicals, metabolic engineering/synthetic biology, bio-based waste-to-energy technologies, and bioprocess design.

    Postdoc (pictured above): Ademola Duduyemi is the postdoc on the project with research interests centered on advancing a circular economy by utilizing agricultural and industrial wastes as low-cost substrates for the sustainable and cleaner production of biofuels and platform chemicals.

    Bioconversion of whey permeate (WP) to value-added compounds and materials is a key prerequisite to eliminating the burden of this waste stream on the dairy industry, and in turn, safeguarding water and soil quality, whilst enhancing the economics of dairy operations. The central thrust of the proposed study is to convert WP at 12-liter bioreactor scale to 2,3-butanediol (2,3BD)–a versatile chemical with numerous industrial applications. We have isolated, sequenced and characterized a strain of Enterobacter hormaechei that produces 42 g/L 2,3BD on lactose as the sole carbon source. In the proposed study, we will demonstrate the use of lactose-rich WP to produce similar titer of 2,3BD in batch fermentation. Additionally, we will use fed-batch fermentation to increase 2,3BD titer to 55 – 60 g/L. In an effort to pave the way for potential commercial scale application of this strain of E. hormaechei to produce 2,3BD in WP, we will de-risk such an effort by inactivating major antibiotic resistance genes in the genome of this organism. The proposed study will provide multifaceted training in fermentation science, analytical chemistry and synthetic biology for a postdoctoral fellow. The results are expected to forge a roadmap for future efforts to convert WP to 2,3BD at pilot scale. Additionally, it is anticipated that the findings will engender similar efforts to de-risk other microorganisms that produce high concentrations of different important compounds, albeit with inherent risks associated with the spread of antibiotic resistance or virulence genes.

    Nutritional strategies to reduce early pregnancy loss in dairy cattle

    PI: Sofia Ortega

    Ortega is an assistant professor of reproductive physiology in the Department of Animal and Dairy Sciences at UW–Madison. Her work focuses on the genetic regulation of fertility with an emphasis in preimplantation embryonic development and placentation in the bovine. She uses novel genomic approaches including gene editing, to investigate the effect of reproduction-related genes on development and physiology.

    Postdoc (pictured above): Froylan Sosa Hernandez is a postdoctoral research associate in Sofia Ortega’s reproductive physiology lab in the Department of Animal and Dairy Sciences at UW–Madison. He received his Ph.D. from the University of Florida in 2022. He attended the veterinary school graduated in 2014 with distinction. His graduate research was focused on the SLICK1 mutation of the PRLR and the use of CSF2 as potential strategies to mitigate deleterious effects of heat stress.

    The Dairy Task Force 2.0 recommended creating the Dairy Innovation Hub (recommendation #2) to address an urgent need for research and innovation to maintain a sustainable competitive advantage of Wisconsin dairies. In addition, recommendation #26 calls for new, unique, impactful ideas to be explored which could provide significant benefits to the dairy industry by leveraging the cross-disciplinary expertise within the UW system. This cross-disciplinary research effort focuses on the nutritional regulation of reproductive function. Specifically, we will investigate an economic dietary strategy to modulate placenta development during the first month after insemination in order to reduce or prevent pregnancy loss. This period was selected as more than 50% of pregnancy losses occur at this time, which places reproductive failure as the second most reported reason for involuntary culling in the US. Aim 1 will determine if essential amino acid supplementation in lactating dairy cows during the first month of pregnancy rescues a high pregnancy loss phenotype due to impaired placental development and function. Aim 2 Will elucidate the mechanisms by which essential amino acids regulate placental function in vitro. Results from this research could not only improve reproductive outcomes and reduce involuntary culling, but it will also reduce production costs, which will contribute to the sustainability of dairy farms.

    Sebastian Arriola-Apelo

    Unlocking the potential of whey: Sustainable production of low-calorie tagatose and prebiotics for value creation and reducing environmental impact

    PI: Scott Rankin

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    Rankin is professor and chair of food science at UW–Madison with an interest in the dairy food processing industry. His research has focused on the characterization of primarily dairy food flavor with sensory and instrumental techniques.

    Postdoc (pictured above): Wenjia Wang is a postdoctoral research associate in the Huber Research Group in the Department of Chemical and Biological Engineering at UW–Madison. He specializes in chemical engineering and is passionate about the intersection of water, energy, food, and environmental sustainability.

    The dairy industry produces approximately 190 million tons of whey per year as a byproduct, often causing environmental concerns due to improper disposal. The lactose in whey is a valuable resource that can be further utilized instead of being disposed of or solely processed into powders for exportation. Simultaneously, the market is experiencing escalating demands for low-calorie sweeteners, such as tagatose, and health-enhancing prebiotics. This project will transform whey into tagatose and prebiotics. The major objectives include 1) identifying and elucidating efficient isomerization processes to convert the galactose, derived from lactose in whey, into tagatose; 2) developing a sustainable process for the production of prebiotic galacto-oligosaccharides (GOS) utilizing whey permeate; and 3) assess the economic viability and environmental impact of this innovative process through TEA and LCA. The methods involve a combination of lab-scale experiments, a range of analytical work, and rigorous data analytics. The ultimate goal of this project is to develop a scalable, cost-effective, and environmentally friendly method for tagatose and GOS production from whey, establishing a win-win situation for both the dairy and food industries. The impacts will be multifaceted: reducing environmental pollution from whey waste, adding economic value to a byproduct, bring a form of economic development to farm business and community sections, and offering health-beneficial ingredients to consumers. Xiaolei Shi and Jarryd Featherman are also CO-PIs on this project.

    George Huber

    Next generation yogurt with dairy probiotic complexes

    PI: Gulustan Ozturk

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    Ozturk is an assistant professor of food science at UW–Madison who specializes in dairy food science. Her position is funded entirely by the Dairy Innovation Hub.

    Postdoc (pictured above): Sonali Mohapatra is a postdoctoral research associate in the Ozturk lab in the Department of Food Science at UW–Madison. She has a decade of experience in fermentation technology and product development, focusing on leveraging agricultural and dairy waste streams to create value-added prebiotic products.

    Probiotics are commonly used as a prophylactic treatment of various gut disorders. However, gastrointestinal survival of probiotics is highly variable among individuals. Approaches to boost and optimize intestinal survival are therefore much welcomed and could even boost probiotic efficacy in the clinic. Whey protein phospholipid concentrate (WPPC) is an underutilized dairy stream, harboring glycoproteins that could be used to promote intestinal survival of probiotics. WPPC-derived glycoproteins possess glycan sites that can specifically bind to probiotics surface receptors, thereby improving their viability and their attachment to epithelial cells, which is corroborated by our exciting preliminary data. In this study, we will use Limosilactobacillus reuteri (L. reuteri)
    as our probiotic test species. Select strains bind intestinal mucins and are established probiotics based on their ability to modulate the immune system, to increase the intestinal barrier function, and to have antimicrobial activity against notorious pathogens. We hypothesize that the formation of WPPC-L. reuteri complexes improves survival in both the food matrix and in the gastrointestinal tract. To test our hypothesis, we will pursue the following aims: 1) to increase the purity of WPPC glycoproteins to promote the formation of WPPC-L. reuteri complexes; 2) to determine the binding efficacy of glycoproteins to complex with L. reuteri strains and to establish the extent by which probiotic survival in yogurt is impacted; 3) to determine gastrointestinal survival of the probiotic
    complexed ± WPPC. The expected outcome of our research is that its successful completion will have delivered a next-generation dairy food by leveraging underutilized materials in the dairy stream, which will improve WPPC marketability and increase profits for dairy farmers and processors. Jan-Peter van Pijkeren is collaborating on this work.

    Assessing changes in the fecal microbiomes of neonatal dairy calves to enhance animal health

    PI: Hilario Mantovani

    Mantovani is an assistant professor of animal and dairy sciences who specializes in rumen microbial physiology at UW–Madison. His research program is focused on understanding the functions and ecological interactions between anaerobic microbes that colonize the gastrointestinal tract of ruminants. Mantovani’s position is funded by the Dairy Innovation Hub.

    Postdoc (pictured above): MD Gahangir Alam is a postdoctoral research associate in the Mantovani lab in the Department of Animal and Dairy Sciences at UW–Madison. He specializes in microbiology.

    Diarrhea is one of the primary causes of mortality in neonatal dairy calves and results in financial losses to dairy farmers. Factors associated with birth seasons such as temperature, crowding and housing conditions, humidity, pathogen distribution, and hygiene conditions also affect the risk of neonatal calves developing diarrhea. Despite the efforts to characterize the changes in the gut microbiome of dairy calves during the pre-weaning period, no study has compared the microbiota of healthy and diarrheic animals using both next-generation sequencing and culturomics approaches or evaluated the influence of seasonal changes in the fecal microbiome of healthy and diarrheic dairy calves. Here we aim to expand the current knowledge regarding the establishment of different microbial groups in the GIT in early life, which could help dairy farmers design more efficient intervention strategies to manage microbial colonization of neonatal calves. We will use Next-Gen Sequencing and culturomics approaches to evaluate differences in the intestinal microbiota of healthy and diarrheic calves in winter and summer periods and will select bacteria with health-promoting activities from healthy animals to develop synthetic microbial consortia with enhanced capacity to convert milk oligosaccharides to short chain fatty acids, particularly butyric acid.

    Jimena Laporta

    Assessing the impact of states and national climate policies and food behavioral changes on the US dairy industry

    PI: Min Chen

    Chen is an assistant professor of forest and wildlife ecology at UW–Madison. His research interests include terrestrial ecosystem/land surface modeling, remote sensing theory and applications, and human-Earth system interactions.

    Postdoc (pictured above): Jiaqi Yang received her Ph.D. from Wuhan University. Her research interests include deep learning, hyperspectral image classification, and data-driven Earth system science.

    Wisconsin is the second-largest dairy producer in the US, but the industry is facing challenges, including climate change and changes in dietary patterns. US climate policies, including carbon pricing, are complex due to variations between states and the federal government. While the US aims for zero emissions by 2050, different states may have differing policies. Wisconsin lacks carbon pricing, but the Wisconsin Climate Action Report and the Senate Bill 70 on WI’s budget, call for a thorough analysis of carbon pricing within the state. Additionally, there is a societal shift towards plant-based diets, partly to mitigate greenhouse gas emissions. The consequences of dietary shifts on the dairy industry depend on the policies implemented by governments. Therefore, this study aims to explore two key questions: 1) How does state-level carbon pricing heterogeneity compared to national uniform carbon pricing impact the dairy industry? 2) How do dietary changes affect dairy production considering various climate policies? The study utilizes a subnational version of the Global Change Analysis Model (GCAM), specifically the GCAM-USA model to address the questions. Multiple scenarios will be designed to project the combined impact of policies and dietary patterns on the dairy industry from 2020 to 2050. The results will provide insights into the alternative future of the dairy industry and the mechanisms driving changes at both the national and state levels, aiding institutional and individual climate mitigation plans, decision-making, and public advocacy for sustainable policies.

    Chuck Nicholson

    Effects of in utero choline exposure on growth, feed efficiency, and carcass quality in Angus x Holstein cattle

    PI: Heather White

    Phone

    Heather White is a professor of animal and dairy sciences at UW–Madison and faculty advisor for the Dairy Innovation Hub. Her research program focuses on the health and nutrition of dairy cows during the transition period and is centered on hepatic and whole-animal nutrient partitioning and metabolism. White’s research strives to determine the mechanism of nutrient partitioning, feed efficiency, and metabolic health in order to provide science-based solutions and interventions to improve dairy cow health and productivity.

    Post-doc (pictured above): Billy Brown received his Phd in Dairy Cattle Nutrition from Kansas State University where he broadly studied mechanisms of feed intake regulation, feeding behavior, and feed intake prediction modeling in lactating cows. Brown is mentored by Heather White from the department of Dairy Science.

     

     

    Research suggests that Rumen protected choline (RPC) may positively affect offspring growth, health, and well-being. RPC is typically fed to gestating dairy cows for three weeks prepartum. In utero choline exposure is an intervention which aims to enhance tissue growth and performance in a growing fetus. Currently the optimal timing, duration, and dose of in utero choline exposure is unclear. The objective of this project is to evaluate the effects of in utero choline exposure on growth, feed efficiency, and Carcass quality in Angus x Holstein cattle.

    Publication in Journal of Animal Science – June 2023

     

    Understanding Hepatic Carbon Metabolism During the Transition to Lactation

    PI: Heather White

    Phone

    White is a professor of animal and dairy sciences at UW–Madison and faculty advisor for the Dairy Innovation Hub. Her research program focuses on the health and nutrition of dairy cows during the transition period and is centered on hepatic and whole-animal nutrient partitioning and metabolism. White’s research strives to determine the mechanism of nutrient partitioning, feed efficiency, and metabolic health in order to provide science-based solutions and interventions to improve dairy cow health and productivity.

    Post-doc (pictured above): Tanya France received her PhD in Animal Science with a concentration in dairy cattle nutrition and molecular nutrition from Cornell University. During her post-doc France intends to form a better understanding of fetal programming and hepatic gene expression and gaining experience in various laboratory analysis techniques.

    White and her post-doc France are investigating hepatic carbon flux during the transition to lactation, a critical period for health and productivity, and the onset of metabolic disorders. This project aims to offer a better understanding of the etiology, onset, progression, and genetic predisposition to metabolic disorders, such as ketosis and fatty liver, in cattle.

    Exploring factors that contribute to nutrient use for feed efficiency

    PI: Heather White

    Phone

    White is a professor of animal and dairy sciences at UW–Madison and faculty advisor for the Dairy Innovation Hub. Her research program focuses on the health and nutrition of dairy cows during the transition period and is centered on hepatic and whole-animal nutrient partitioning and metabolism. White’s research strives to determine the mechanism of nutrient partitioning, feed efficiency, and metabolic health in order to provide science-based solutions and interventions to improve dairy cow health and productivity.

    Post-doc (pictured above): Usman Arshad is a postdoctoral research associate in Heather White’s lab at UW–Madison. Usman is from Pakistan and recently received his PhD in animal molecular and cell biology from the University of Florida with a major concentration in dairy cattle nutrition and reproduction. Usman is passionate about transition cow management and exploring molecular and cellular pathways related to hepatic tissue metabolism and feed efficiency in dairy cows.

    White and her postdoc Arshad are exploring the factors that contribute to the nutrient use for feed efficiency. The ultimate goal is to understand nutrient use efficiency at cellular and whole-animal level to improve feed efficiency and reduce methane emissions in dairy cows.

    Improving pest management to expand adoption of intercropping alfalfa and corn for Wisconsin dairies

    PI: Mark Renz

    Phone

    Renz is a professor of agronomy and extension specialist at UW–Madison. The goal of his research is to improve the management of invasive plants in natural areas and weeds in perennial agronomic systems.

    Postdoc: Md Rayhan Shaheb (pictured above) recently completed a postdoctoral research scholar position at The Ohio State University, where he designed and conducted research on soil management and crop production systems. His research interests include crop productions and cropping systems analysis, soil, water and nutrient management, agriculture, integrated farming system research, food and nutritional security and crop modeling.

    Establishing alfalfa by interseeding into a high-yielding corn silage companion crop can increase yields and profitability of forage production on dairy farms. Additionally, this practice reduces the risk of nutrient and soil loss due to living cover being present in fields, both during and after corn production. Adoption was previously hampered by unreliable survival of alfalfa underneath corn. Recent research has identified that annual grasses, alfalfa foliar diseases and potato leafhoppers are the primary reasons for poor alfalfa establishment. While research in Wisconsin has identified pesticide treatments for ensuring good establishment, added cost and negative impacts from extensive agrichemical use deters adoption. Knowledge of thresholds where pesticides benefit establishment are not known. We propose to determine what levels of annual grass weeds, potato leafhoppers, and alfalfa foliar injury reduce establishment of interseeded alfalfa. Experiments will be conducted at Arlington, Prairie du Sac and Lancaster research stations where a wide range of pest levels will be imposed. Relationships between alfalfa survival and pest levels will be determined and validates across six on farm demonstrations. Results will be disseminated to stakeholders to improve pest management and adoption of this practice. At the conclusion of the study, we will survey stakeholders and producers to determine the impact of this project and identify additional obstacles that prevent adoption of this system on Wisconsin dairy farms. This project will aid the adoption of more sustainable forage production practices that will limit environmental impacts while enhancing farm productivity and profitability.

    Publication in Agronomy for Sustainable Development – August 2021

    Damon Smith